To answer your question, NO. The dealer will make you to pay those fees.
99.9% of auto dealers on eBay will NOT accept the payment via Paypal. I also read somewhere that it is against PayPal's policy to pay for vehicle which is over $2,000
I sell cars on eBay and I normally receive the deposit via PayPal and the remaining via wire transfer. The main reason is that a wire transfer takes about 2-5 hours to post on my bank account. So, for example, if the buyer wires the money early in the morning, I overnight the title and other documents the same day in order to speed up the process.
Before wiring the funds, ask the seller to send you the Bill of Sale.
I ship cars almost every other week and can hook you up with a transporter. Let me know, I'll be glad to help you out or answer any questions you may have.