Mike,
Here is pict of the plastic trim and the rubber.
http://s932.photobucket.com/albums/a...t=IMG_1526.jpg
They do line up normal. However, as you see the rubber was cut someplace near to the roof and another one positioned next to it. I would say there is 1 mm of space between the rubbers. Can it be a problem? Also I may need to mention that I can also hear wind noise from the moonroof area as well. Can a leak in windshield can propagate to the moonroof?
I checked the plastic housing on the cowl. I only have one in the middle and it looks okay.